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Structural-function Discovery Laboratory

  효소구조기능연구실

 Structure-Function Discovery Laboratory

Structures

MnmM from B. subtilis and S. aureus complexed with anticodon stem-loop 이미지
MnmM from B. subtilis and S. aureus complexed with anticodon stem-loop PDB: 8H1B Crystal structure of MnmM from S. aureus complexed with SAM and tRNA anti-codon stem loop (ASL) (1.55 A) PDB: 8H0S Crystal structure of MnmM from B. subtilis complexed with Gln-TTG anti-codon stem loop and SAM (2.90 A) PDB: 8H1A Crystal structure of MnmM from S. aureus in apo state (1.44 A) PDB: 8H0T Crystal structure of MnmM from B. subtilis complexed with SAH (1.17 A) PDB: 8H27 Crystal structure of MnmM from S. aureus complexed with SAM (2.04 A) Publication Identification of a novel 5-aminomethyl-2-thiouridine methyltransferase in tRNA modification Author: Gyuhyeok Cho, Jangmin Lee, and Jungwook Kim Nucleic Acids Res. 2023 Feb 10;gkad048. doi: 10.1093/nar/gkad048.
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TrmM from Mycoplasma capricolum in apo and SAH-bound state 이미지
TrmM from Mycoplasma capricolum in apo and SAH-bound state PDB: 7WM5 Title: Crystal structure of apo TrmM from Mycoplasma capricolum PDB: 7WM6 Title: Crystal structure of SAH-bound TrmM from Mycoplasma capricolum Publication Structural and functional characterization of TrmM in m6A modification of bacterial tRNA Author: Hyeonju Jeong, Yeji Lee and Jungwook Kim Protein Sci. 2022 May;31(5):e4319. doi: 10.1002/pro.4319.
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E. coli Valine tRNA 이미지
E. coli Valine tRNA PDB: 7EQJ Title: Crystal structure of E. coli Valine tRNA Publication Unique anticodon loop conformation with the flipped-out wobble nucleotide in the crystal structure of unbound tRNAVal Author: Hyeonju Jeong and Jungwook Kim RNA. 2021 Nov;27(11):1330-1338. doi: 10.1261/rna.078863.121.
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PSD from E. coli in apo and substrate conjugated forms 이미지
PSD from E. coli in apo and substrate conjugated forms PDB: 7CNW Title: Crystal structure of Apo PSD from E. coli (1.90 A) PDB: 7CNX Title: Crystal structure of Apo PSD from E. coli (2.63 A) PDB: 7CNY Title: Crystal structure of 8PE bound PSD from E. coli (2.12 A) PDB: 7CNZ Title: Crystal structure of 10PE bound PSD from E. coli (2.70 A) Publication Structural insights into phosphatidylethanolamine formation in bacterial membrane biogenesis Author : Gyuhyeok Cho, Eunju Lee and Jungwook Kim Sci Rep. 2021 Mar 11;11(1):5785. doi: 10.1038/s41598-021-85195-5
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